Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829606.1_cds_XP_016503804.1_17312
CDS Infomation

[gene=LOC107821864] [db_xref=GeneID:107821864] [protein=regulatory protein NPR1-like] [protein_id=XP_016503804.1] [location=complement(join(53588..53859,54701..54901,56025..56772,59301..59846))] [gbkey=CDS]
Sequence

ATGGATAATAGTAGGACTGCGTTTTCTGATTCGAATGACATCAGCGGAAACAGTAGTATA
TGCTGCATCGGCGGCGGCATGACTGAATTTTTCTCGCCGGAGACTTCGCCGGCAGAGATC
ACTTCACTGAAACGCCTCTCGGAAACACTGGAATCTATCTTCGATGCGTCTTTGCCGGAG
TTTGACTACTTCGCCGACGCTAAGCTTGTGGTTCCCGGCGCCGGTAAGGAAATTCCGGTG
CACCGGTGCATTTTGTCGGCGAGGAGTCCGTTCTTTAAGAATTTGTTCTGCGGGAAAAAG
GAGAAGAATAGTAGTAAGGTGGAATTAAAGGAAGTTATGAAAGAGTATGAAGTGAGCTAT
GACGCTGTAGTGAGTGTGTTGGCTTATTTGTATAGTGGAAAAGTTAGGCCTTCACCTAAG
GATGTTTGTGTTTGTGTGGACAATGAGTGCTCTCATGTGGCGTGTAGGCCAGCTGTAGCG
TTCCTTGTTGAGGTTTTGTACACATCTTTTACCTTTCAGATATCTGAATTGGTCGACAAG
TTTCAGAGACACCTATTGGATATTCTTGACAAAGCTGCAGCAGACGATGTAATGATGGTT
TTATCTGTTGCAAACATTTGTGGTAAAGCATGCGATAGATTGCTTTCAAGCTGCATTGAG
ATTATTGTCAAGTCTAACGTTGATATCATAACCCTTGATAAGGCCTTGCCTCATGATATT
GTAAAACAAATTACCGATTCACGTGCGGAACTTGGTCTACAAGGGCCTGAAAGCAATGGT
TTTCCTGATAAACATGTTAAGAGGATACATAGGGCATTGGATTCTGATGATGTTGAATTA
CTACAGATGTTGCTAAGAGAGGGGCATACTACTCTAGATGATGCATATGCTCTCCATTAT
GCTGTAGCATATTGCGATGCAAAGACTACAGCAGAACTTCTAGATCTTGCACTTGCTGAT
GTTAATCATCAAAATTCAAGAGGATACACGGTGCTGCATGTTGCAGCTATGAGGAAAGAG
CCTAAAACTATAGTGTCCCTTTTAACCAAAGGGGCTAGACCTTCTGATCTGACATCCGAT
GGCAGAAAAGCACTTCAAATTGCCAAGAGGCTCACTAGGCTTGTGGATTTCAGTAAGTCT
CCGGAGGAAGGAAAGTCTGCTTCGAAGGATCGGTTATGCATTGAGATTCTGGAGCAAGCA
GAAAGAAGAGATCCACTGCTAGGAGAAGCTTCTGTATCTCTTGCTATGGCAGGCGATGAT
TTGCGTATGAAGCTGTTATATCTTGAAAATAGAGTTGGCCTGGCTAAACTCCTTTTTCCA
ATGGAAGCAAAAGTTGCAATGGACATTGCTCAAGTTGATGGCACTTCTGAGTTCCCACTG
GCTAGCATCGGCAAAAAGATGGCTAATGCACAGAGGACAACAGTAGATTTGAACGAGGCT
CCTTTCAAGATAAAAGAGGAGCACTTGAATCGGCTTAGAGCACTCTCTAGAACTGTGGAA
CTTGGAAAACGCTTCTTTCCACGTTGTTCAGAAGTTCTAAATAAGATCATGGATGCGGAT
GACTTGTCTGAGATAGCTTACATGGGGAATGATACAGCAGAAGAGCGTCAACTGAAGAAG
CAAAGGTATATGGAACTTCAAGAAATTCTGAGTAAAGCATTCACTGAGGATAAAGAAGAA
TTTGATAAGACTAACCACCTCTCCTCATCTTGTTCCTCTACATCTAAGGGAGTAGATAAG
CCCAATAAGCTCCCTTTTAGGAAATAG

Peptide Sequence

PEP ID

XP_016503804.1
PEP Infomation

PREDICTED: regulatory protein NPR1-like [Nicotiana tabacum]
Sequence

MDNSRTAFSDSNDISGNSSICCIGGGMTEFFSPETSPAEITSLKRLSETLESIFDASLPE
FDYFADAKLVVPGAGKEIPVHRCILSARSPFFKNLFCGKKEKNSSKVELKEVMKEYEVSY
DAVVSVLAYLYSGKVRPSPKDVCVCVDNECSHVACRPAVAFLVEVLYTSFTFQISELVDK
FQRHLLDILDKAAADDVMMVLSVANICGKACDRLLSSCIEIIVKSNVDIITLDKALPHDI
VKQITDSRAELGLQGPESNGFPDKHVKRIHRALDSDDVELLQMLLREGHTTLDDAYALHY
AVAYCDAKTTAELLDLALADVNHQNSRGYTVLHVAAMRKEPKTIVSLLTKGARPSDLTSD
GRKALQIAKRLTRLVDFSKSPEEGKSASKDRLCIEILEQAERRDPLLGEASVSLAMAGDD
LRMKLLYLENRVGLAKLLFPMEAKVAMDIAQVDGTSEFPLASIGKKMANAQRTTVDLNEA
PFKIKEEHLNRLRALSRTVELGKRFFPRCSEVLNKIMDADDLSEIAYMGNDTAEERQLKK
QRYMELQEILSKAFTEDKEEFDKTNHLSSSCSSTSKGVDKPNKLPFRK

Transcript Sequence

Gene sequence data has not been registered.